Structure of PDB 7c45 Chain A Binding Site BS02

Receptor Information
>7c45 Chain A (length=295) Species: 185431 (Trypanosoma brucei brucei TREU927) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SATSSSSMILKYPYRVVDTHEKLKEAVTSLQGARSIALDIEAFCTTDQAK
QLGRISLVQACSDAKPVVFLFDVLTLTPDVFVKDMQSLLSDREIRKLFFD
CRRDVEALSCQLGVKPEGVLDLQVFFTAIQWKLRSVNRRSGMGYVLKSVA
GLTRDSAVQTAMTLRPVWDIRPLPDHFLEYAAGDVRHILLLSNYLVGNKD
VPVDVVAVERLTAQYVEHYAVGKPVITEADATPAEVNRAWLERYIGPGGG
CHFCGAKGHTEAECFKKQNGKAKCSFCGEVGHTARNCFKKHPQLL
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7c45 Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7c45 Structural basis for guide RNA trimming by RNase D ribonuclease in Trypanosoma brucei.
Resolution1.769 Å
Binding residue
(original residue number in PDB)
C297 C300 H305 C310
Binding residue
(residue number reindexed from 1)
C251 C254 H259 C264
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
GO:0008408 3'-5' exonuclease activity
Biological Process
GO:0006139 nucleobase-containing compound metabolic process

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Molecular Function

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Biological Process
External links
PDB RCSB:7c45, PDBe:7c45, PDBj:7c45
PDBsum7c45
PubMed33332555
UniProtQ38DE2

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