Structure of PDB 6z7p Chain A Binding Site BS02

Receptor Information
>6z7p Chain A (length=1025) Species: 190650 (Caulobacter vibrioides CB15) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AYTTAQLVTAYTNANLGKAPDAATTLTLDAYATQTQTGGLSDAAALTNTL
KLVNSTTAVAIQTYQFFTGVAPSAAGLDFLVDSTTNTNDLNDAYYSKFAQ
ENRFINFSINLATGAGAGATAFAAAYTGVSYAQTVATAYDKIIGNAVATA
AGVDVAAAVAFLSRQANIDYLTAFVRANTPFTAAADIDLAVKAALIGTIL
NAATVSGIGGYATATAAMINDLSDGALSTDNAAGVNLFTAYPSSGVSGST
LSLTTGTDTLTGTANNDTFVAGEVAGAATLTVGDTLSGGAGTDVLNWVQA
AAVTALPTGVTISGIETMNVTSGAAITLNTSSGVTGLTALNTNTSGAAQT
VTAGAGQNLTATTAAQAANNVAVDGGANVTVASTGVTSGTTTVGANSAAS
GTVSVSVANSSTTTTGAIAVTGGTAVTVAQTAGNAVNTTLTQADVTVTGN
SSTTAVTVTQTAAATAGATVAGRVNGAVTITDSAAASATTAGKIATVTLG
SFGAATIDSSALTTVNLSGTGTSLGIGRGALTATPTANTLTLNVNGLTTT
GAITDSEAAADDGFTTINIAGSTASSTIASLVAADATTLNISGDARVTIT
SHTAAALTGITVTNSVGATLGAELATGLVFTGGAGADSILLGATTKAIVM
GAGDDTVTVSSATLGAGGSVNGGDGTDVLVANVNGSSFSADPAFGGFETL
RVAGAAAQGSHNANGFTALQLGATAGATTFTNVAVNVGLTVLAAPTGTTT
VTLANATGTSDVFNLTLSSSAALAAGTVALAGVETVNIAATDTNTTAHVD
TLTLQATSAKSIVVTGNAGLNLTNTGNTAVTSFDASAVTGTGSAVTFVSA
NTTVGEVVTIRGGAGADSLTGSATANDTIIGGAGADTLVYTGGTDTFTGG
TGADIFDINAIGTSTAFVTITDAAVGDKLDLVGISTNGAIADGAFGAAVT
LGAAATLAQYLDAAAAGDGSGTSVAKWFQFGGDTYVVVDSSAGATFVSGA
DAVIKLTGLVTLTTSAFATEVLTLA
Ligand information
Ligand IDBMA
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-RWOPYEJCSA-N
SMILES
SoftwareSMILES
CACTVS 3.341OC[C@H]1O[C@@H](O)[C@@H](O)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@@H]([C@@H]([C@@H](O1)O)O)O)O)O
ACDLabs 10.04OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namebeta-D-mannopyranose;
beta-D-mannose;
D-mannose;
mannose
ChEMBL
DrugBank
ZINCZINC000003830679
PDB chain6z7p Chain B Residue 4 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6z7p In Situ Structure of an Intact Lipopolysaccharide-Bound Bacterial Surface Layer.
Resolution4.8 Å
Binding residue
(original residue number in PDB)		Y95 N107 N111
Binding residue
(residue number reindexed from 1)		Y94 N106 N110
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Cellular Component
GO:0005576 extracellular region
GO:0030115 S-layer

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6z7p, PDBe:6z7p, PDBj:6z7p
PDBsum6z7p
PubMed31883796
UniProtP35828|SLAP_CAUVC S-layer protein (Gene Name=rsaA)

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