Structure of PDB 6xq7 Chain A Binding Site BS02

Receptor Information
>6xq7 Chain A (length=212) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GAMAQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGG
GPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQ
IPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEK
GVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRHRA
LRTAPIQPRVWE
Ligand information
Ligand IDV6V
InChIInChI=1S/C10H8BrNO2/c1-5-7-4-6(11)2-3-8(7)12-9(5)10(13)14/h2-4,12H,1H3,(H,13,14)
InChIKeyYUMRTSLYUVLHQK-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7Cc1c2cc(ccc2[nH]c1C(=O)O)Br
ACDLabs 12.01Cc2c1c(ccc(c1)Br)nc2C(O)=O
CACTVS 3.385Cc1c([nH]c2ccc(Br)cc12)C(O)=O
FormulaC10 H8 Br N O2
Name5-bromo-3-methyl-1H-indole-2-carboxylic acid
ChEMBL
DrugBank
ZINCZINC000000521431
PDB chain6xq7 Chain A Residue 307 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6xq7 A fragment-based approach to discovery of Receptor for Advanced Glycation End products inhibitors.
Resolution1.8 Å
Binding residue
(original residue number in PDB)		R48 L49 Q100 A101
Binding residue
(residue number reindexed from 1)		R29 L30 Q81 A82
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:6xq7, PDBe:6xq7, PDBj:6xq7
PDBsum6xq7
PubMed34156100
UniProtQ15109|RAGE_HUMAN Advanced glycosylation end product-specific receptor (Gene Name=AGER)

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