Structure of PDB 6xl1 Chain A Binding Site BS02

Receptor Information
>6xl1 Chain A (length=373) Species: 869209 (Treponema succinifaciens DSM 2489) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKETILVNLVSEQTIPNVQFIKWYFNKKQTPMKILLVSTKEMEQKEKSLF
IKNALHFSDSFVEWETIHTDGNDISKTENILTDYFRDNEYKNIIVNITGG
TKIMSLAAFDFFNNKPNTEIFYQPIGKELQELYPNKQKYDMFEVLSLKEY
LDAHGISYKYDNECVKDWNYNKTVYDLCVADNRELIKGMIALQNNSYFNN
VYKRKDFLDFTQIEEEKFIAINHPAATKENMIKILQIFGFDVSRIEHKHI
RYITGGWFEEYVYQKICNEYHNVDEKNVALNVTIQKGNDKNELNVIYLDK
DNKLHVIECKSFVDGNEGNRVLNDALYKLQAIIKSKFGLYVKQHLYTKSI
IEKETPLNRAKEFGIDIKDGTQL
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain6xl1 Chain A Residue 901 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6xl1 The Card1 nuclease provides defence during type III CRISPR immunity.
Resolution1.95 Å
Binding residue
(original residue number in PDB)		N294 E308 C309 K310
Binding residue
(residue number reindexed from 1)		N294 E308 C309 K310
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6xl1, PDBe:6xl1, PDBj:6xl1
PDBsum6xl1
PubMed33461211
UniProtF2NWD3

[Back to BioLiP]