Structure of PDB 6wbt Chain A Binding Site BS02

Receptor Information
>6wbt Chain A (length=442) Species: 408169 (metagenomes) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DKELKIVICGGGSTYTPGIVKDLLDQRQKINIKELWLYDIDEERQNKVAL
IVKEVIKTEAPEVVLKVTVNPKEAFTDADYIMAQMRVGGLKMRVKDEQIC
LKHGCVGQETCGAGGMTYGMRTIYPMVQLIDYCEEYASKKYWIVNYSNPA
AIVAKATYKLRPKARIINICDMPVEIEARMAEILDCKLEDIESDYFGLNH
YGWFTHVRCKGVDVTDKLKEHVRKYGYVSEASMNDALLKDPDWVHTFKNS
ALISSMFTDYLPNTYWQYYLMPDSIVDYMDINNTRGMQVINGREKRIFKA
AEDIREGKPVDLQQFYVGVHGKFIVKVVESLIHDERSRQLVIVPNNGAIE
NLSDDATVEIPGYVTDRGVEPVRVGSIPRFYKGLIEQQDACEGLLVEAAI
EHSYEKALMAFTMNRTIPSSLVAKKLLDDMIEANKGYWPELK
Ligand information
Ligand IDG6P
InChIInChI=1S/C6H13O9P/c7-3-2(1-14-16(11,12)13)15-6(10)5(9)4(3)8/h2-10H,1H2,(H2,11,12,13)/t2-,3-,4+,5-,6+/m1/s1
InChIKeyNBSCHQHZLSJFNQ-DVKNGEFBSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O)OP(=O)(O)O
CACTVS 3.341O[CH]1O[CH](CO[P](O)(O)=O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341O[C@H]1O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H](O)[C@H]1O
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)O)O)O)OP(=O)(O)O
ACDLabs 10.04O=P(O)(O)OCC1OC(O)C(O)C(O)C1O
FormulaC6 H13 O9 P
Name6-O-phosphono-alpha-D-glucopyranose;
ALPHA-D-GLUCOSE-6-PHOSPHATE;
6-O-phosphono-alpha-D-glucose;
6-O-phosphono-D-glucose;
6-O-phosphono-glucose
ChEMBL
DrugBankDB02007
ZINCZINC000003875375
PDB chain6wbt Chain A Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6wbt 2.52 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Gut Microorganisms in Complex with NAD and Glucose-6-phosphate
Resolution2.52 Å
Binding residue
(original residue number in PDB)		R94 E110 N149 D172 M173 H201 W244 Y266 R286 R294
Binding residue
(residue number reindexed from 1)		R93 E109 N148 D171 M172 H200 W243 Y265 R285 R293
Annotation score4
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 15 09:18:24 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6wbt', asym_id = 'A', bs = 'BS02', title = '2.52 Angstrom Resolution Crystal Structure of 6-...isms in Complex with NAD and Glucose-6-phosphate '
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6wbt', asym_id='A', bs='BS02', title='2.52 Angstrom Resolution Crystal Structure of 6-...isms in Complex with NAD and Glucose-6-phosphate ')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003824,0004553,0005975,0016616', uniprot = '', pdbid = '6wbt', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003824,0004553,0005975,0016616', uniprot='', pdbid='6wbt', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>