Structure of PDB 6sdo Chain A Binding Site BS02

Receptor Information
>6sdo Chain A (length=360) Species: 5693 (Trypanosoma cruzi) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MASMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYF
RGMTVVNVAEGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDI
MDGSVMRRGKPCWYRFPGVTTQCAINDGIILKSWTQIMAWHYFADRPFLK
DLLCLFQKVDYATAVGQMYDVTSMCDSNKLDPEVAQPMTTDFAEFTPAIY
KRIVKYKTTFYTYLLPLVMGLLVSEAAASVEMNLVERVAHLIGEYFQVQD
DVMDCFTPPEQLGKVGTDIEDAKCSWLAVTFLGKANAAQVAEFKANYGEK
DPAKVAVVKRLYSKANLQADFAAYEAEVVREVESLIEQLKVKSPTFAESV
AVVWEKTHKR
Ligand information
Ligand IDZCQ
InChIInChI=1S/C6H5NO3/c8-6-3-1-2-5(4-6)7(9)10/h1-4,8H
InChIKeyRTZZCYNQPHTPPL-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 12.01O=[N+]([O-])c1cccc(O)c1
OpenEye OEToolkits 1.7.6c1cc(cc(c1)O)[N+](=O)[O-]
CACTVS 3.370Oc1cccc(c1)[N+]([O-])=O
FormulaC6 H5 N O3
Name3-nitrophenol
ChEMBLCHEMBL13888
DrugBank
ZINCZINC000001576887
PDB chain6sdo Chain A Residue 404 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6sdo Trypanosoma cruzi farnesyl diphosphate synthase in complex with 3np
Resolution1.68 Å
Binding residue
(original residue number in PDB)		F50 T54 Y213 F246
Binding residue
(residue number reindexed from 1)		F50 T54 Y213 F246
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) K48 H93 D98 D102 R107 D170 K207 F246 D250 D251
Catalytic site (residue number reindexed from 1) K48 H93 D98 D102 R107 D170 K207 F246 D250 D251
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004659 prenyltransferase activity
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
Biological Process
GO:0008299 isoprenoid biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6sdo, PDBe:6sdo, PDBj:6sdo
PDBsum6sdo
PubMed
UniProtQ8WS26

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