Structure of PDB 6rgj Chain A Binding Site BS02

Receptor Information
>6rgj Chain A (length=344) Species: 291112 (Photorhabdus asymbiotica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TIALSEIVSVVNTSDGRLEVFGVGTDKAVWHNRQMAPHTGSPWSGWSSLK
GQVTSKPVVYINTDGRLEVFARGTDNALWHIWQTATNAGWSNWQSLGGVI
TSNPAIYANTDGRLEVFARGADNALWHISQTTAHSGPWSSWASLNGVITS
NPTVHINSDGRLEVFARGTDNALWHIWQTAPDSNLWSSWESLNGIITSDP
VVIDTADGRLEVFARGADNALWHIWQTISHSGPWSGWQSLNGVITSAPAV
AKNCDNRLEAFARGTDNALWHTWQTVSHSGPWSSWQSLNGVITSAPTAVR
DADGRLEVFARGTDNALWLTWQTASSWSPWISLGGVLIDASAIK
Ligand information
Ligand IDBGC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namebeta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL1614854
DrugBankDB02379
ZINCZINC000003833800
PDB chain6rgj Chain A Residue 404 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6rgj Heptabladed beta-propeller lectins PLL2 and PHL from Photorhabdus spp. recognize O-methylated sugars and influence the host immune system.
Resolution1.8 Å
Binding residue
(original residue number in PDB)		R186 E188 H200 W202 W259
Binding residue
(residue number reindexed from 1)		R161 E163 H175 W177 W234
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6rgj, PDBe:6rgj, PDBj:6rgj
PDBsum6rgj
PubMed32559333
UniProtC7BLE4

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