Structure of PDB 6pe2 Chain A Binding Site BS02

Receptor Information

>6pe2 Chain A (length=456) Species: 7227 (Drosophila melanogaster) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

TLEYEMRRLEQQLRESQQLEESLRKIFTDTQIRILKNGGQRATFNSDDIS
TAICLHTAGPRAYNHLYKKGFPLPSRTTLYRWLSDVDIKRGCLDVVIDLM
DSDGVDDADKLCVLAFDEMKVAAAFEYDSSADIVYEPSDYVQLAIVRGLK
KSWKQPVFFDFNTRMDPDTLNNILRKLHRKGYLVVAIVSDLGTGNQKLWT
ELGISESKTWFSHPADDHLKIFVFSDTPHLIKLVRNHYVDSGLTINGKKL
TKKTIQEALHLCNKSDLSILFKINENHINVRSLAKQKVKLATQLFSNTTA
SSIRRCYSLGYDIENATETADFFKLMNDWFDIFNSKLSTSNCIECSQPYG
KQLDIQNDILNRMSEIMRTGILDKPKRLPFQKGIIVNNASLDGLYKYLQE
NFSMQYILTSRLNQDIVEHFFGSMRSRGGQFDHPTPLQFKYRLRKYIIAR
NTEMLR

Ligand information

>6pe2 Chain D (length=27) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

aggtggtcccgtcggcaagagacatcc

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	6pe2 Structure of a P element transposase-DNA complex reveals unusual DNA structures and GTP-DNA contacts.
Resolution	4.0 Å
Binding residue (original residue number in PDB)	Q153 R154 P173 R174 R189 Y193 S242 G541 Y554 K558
Binding residue (residue number reindexed from 1)	Q40 R41 P60 R61 R76 Y80 S129 G428 Y441 K445

Enzymatic activity

Enzyme Commision number

2.7.7.-

External links

PDB	RCSB:6pe2, PDBe:6pe2, PDBj:6pe2
PDBsum	6pe2
PubMed	31659330
UniProt	Q7M3K2\|PELET_DROME Transposable element P transposase (Gene Name=T)

[Back to BioLiP]