Structure of PDB 6nvo Chain A Binding Site BS02

Receptor Information
>6nvo Chain A (length=200) Species: 160488 (Pseudomonas putida KT2440) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NYQPIEHRGQALWLLADKAIYWPARRALLVADVHIGKAASYGTTEATLAR
LDRLLAEHDCEQLIILGDFLHARTARAPATLAKVEDWRKRHKNLKVVLIR
GNHDRNAGDPPASLDIQVVDEPWVLEPFALQHEPQPHGTHPVLAGHVHPV
FVLRGRLRLPCFVIDEQVSLLPAFGEFTGGWEITPASASRLYLAGRVWPL
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain6nvo Chain A Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6nvo Activity and structure ofPseudomonas putidaMPE, a manganese-dependent single-strand DNA endonuclease encoded in a nucleic acid repair gene cluster.
Resolution2.196 Å
Binding residue
(original residue number in PDB)		D33 H35 D78 H158
Binding residue
(residue number reindexed from 1)		D32 H34 D68 H148
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6nvo, PDBe:6nvo, PDBj:6nvo
PDBsum6nvo
PubMed30894417
UniProtQ88NV2

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