Structure of PDB 6lrd Chain A Binding Site BS02

Receptor Information
>6lrd Chain A (length=698) Species: 1299 (Deinococcus radiodurans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RPAHWLLAPPASRDALLATMREWQVSPPVAQVLCGRDLRTELLALPLELT
PNPALREAARHIVAAVREGKRIRIHGDYDADGVSATATLVLGLRAIGANV
HGFIPHRLNEGYGIHPDRVPEHAAAADLVVTVDCGVSNLDEVKSLLATGT
EVVVTDHHAPGENFPECLVVHPHLTPDYDPDRHNLTGAGVAYHLLWAVYE
ELGRPEPRALLPLATLGTVADVAPLLGENRALVRAGLAEMARTELPGLRA
LMNEKRVRQPTARDVAFILAPRINAAGRMGEADRALELLTTPSDHEAKSL
AAYLEIRNQERRKIQDDMFAQALQLADPNDPALVLTHDDWHAGVMGIVAS
KLVETFNRPVYIVAQGKGSVRSTPGISAVQGLRESRDLLGRFGGHPGAAG
FSLDPQNFGALRERIHGYVRQFPTPVPAVRLDAPLPVAALTPELLSELSI
LEPFGEGNPRPLWHLRGPLTDTRLVGKQGDVLQFRFGGVKGMKYSERDDA
AGERDVAAELALNTSLELHAAALRPLAPLALAGTEEGLPTLPRLNPREAM
TFLKTGAAAYAEQGVATYLRDNVPGLTLLDTNAPHPGGDLILYGLPPESA
LRRWLHEAQEQGGRVAFALGPKTLAELDAALTLAKLLPDSHTEAAQEAAA
DAYRSWQWAHHYRVLNDAGWSASVYAMLGLPVPAALPKAAEALALAAG
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6lrd Participation of RecJ in the base excision repair pathway of Deinococcus radiodurans.
Resolution1.90134 Å
Binding residue
(original residue number in PDB)		P553 V572 Y575 Y600 G627 P628 K629
Binding residue
(residue number reindexed from 1)		P546 V565 Y568 Y593 G620 P621 K622
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0004527 exonuclease activity
GO:0008409 5'-3' exonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0006281 DNA repair
GO:0006310 DNA recombination

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Molecular Function
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Biological Process
External links
PDB RCSB:6lrd, PDBe:6lrd, PDBj:6lrd
PDBsum6lrd
PubMed32870272
UniProtD0EM60

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