Structure of PDB 6lce Chain A Binding Site BS02

Receptor Information
>6lce Chain A (length=407) Species: 216816 (Bifidobacterium longum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ATAEGIPAKGTDDGTEITLWTRSPLERQAKNVVEAYNKSHKNQVKLEIIP
NDDMEGKVGGASQTDSLPDILAGDVVRIPYWASEGIFTDITKQIDGLDNK
ADLQQGHIEAGTVDGAEYTLPFITDVSVMVWNKNLYKEAGLDPEQGPKSI
DQFVEQAKKVAALNKDGVAGSYLAGQSGGALVFDLFPSVWADGESVMNKD
GSEATLDNDSMKGVLDAYKELANTTNGLGAGSKEETGATWTAPFANGKIG
VMPYPNTSTTALFDAEKDGGFEVGVAPIPGTKEGKTSTFLGGDAMGISKD
SKHVAQAWNFLYWLMQSDAQKEVFADQGDTASNIQTLKTAYKDADPRIQT
INSVIIDGNGQTPKSPAFNEAFNAAGSPWQLLVQNAVWGSGDLKADNKAV
TDVLSAQ
Ligand information
Ligand IDFUB
InChIInChI=1S/C5H10O5/c6-1-2-3(7)4(8)5(9)10-2/h2-9H,1H2/t2-,3-,4+,5-/m0/s1
InChIKeyHMFHBZSHGGEWLO-KLVWXMOXSA-N
SMILES
SoftwareSMILES
CACTVS 3.341OC[C@@H]1O[C@H](O)[C@H](O)[C@H]1O
OpenEye OEToolkits 1.5.0C([C@H]1[C@@H]([C@H]([C@H](O1)O)O)O)O
OpenEye OEToolkits 1.5.0C(C1C(C(C(O1)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH]1O
ACDLabs 10.04OC1C(OC(O)C1O)CO
FormulaC5 H10 O5
Namebeta-L-arabinofuranose;
beta-L-arabinose;
L-arabinose;
arabinose
ChEMBL
DrugBank
ZINCZINC000004097027
PDB chain6lce Chain B Residue 2 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6lce Structural analysis of beta-L-arabinobiose-binding protein in the metabolic pathway of hydroxyproline-rich glycoproteins in Bifidobacterium longum.
Resolution1.78 Å
Binding residue
(original residue number in PDB)		R56 D108 D159 F217 G325 G326
Binding residue
(residue number reindexed from 1)		R22 D74 D125 F183 G291 G292
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links