Structure of PDB 6l5r Chain A Binding Site BS02

Receptor Information
>6l5r Chain A (length=447) Species: 49827 (Glycyrrhiza glabra) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HPVVHVALLPSAGMGHLTPFLRLASLLLHQHCHVTLITPQPTVSKAEEDL
LSRFLSAFPQVNQLHFHLPTDPFFLQFASIRSSSHLLTPLLSSLTPPLSS
FIYDMTLISPLLPIAESLGVPHYILFTSSATMFSFFSYFPTLAKSESFPG
KLDFVEIPGVSVSSIPRSSIPPPLLVPNSLFGKLFMEDSPKLKKLHGVLV
NTFEGIEKLSLEALNGGKVVKGLPPVYGVGPFVPCEFEKVETISEWLDEQ
PSGSVVYVSFGSRTAMGREQLREVGDGLVKSGWRFLWVVKDKIVDRAEEE
GLDGVLGFELVERMVKEKKGLVVKEWVDQSEILGHKAVGGFVSHCGWNSV
VEAAWFGVKILGWPLHGDQKINAEVVAKGGWGVWKEGWDWEGERLVKGEE
IGEAIREVMNDESLVMKATQVKKDARKAISVGGGCEVALQKLMEVWK
Ligand information
Ligand IDG50
InChIInChI=1S/C15H14O5/c16-10-4-1-9(2-5-10)3-6-12(18)15-13(19)7-11(17)8-14(15)20/h1-2,4-5,7-8,16-17,19-20H,3,6H2
InChIKeyVGEREEWJJVICBM-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341Oc1ccc(CCC(=O)c2c(O)cc(O)cc2O)cc1
OpenEye OEToolkits 1.5.0c1cc(ccc1CCC(=O)c2c(cc(cc2O)O)O)O
ACDLabs 10.04O=C(c1c(O)cc(O)cc1O)CCc2ccc(O)cc2
FormulaC15 H14 O5
Name3-(4-HYDROXYPHENYL)-1-(2,4,6-TRIHYDROXYPHENYL)PROPAN-1-ONE
ChEMBLCHEMBL45068
DrugBankDB07810
ZINCZINC000000047553
PDB chain6l5r Chain A Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6l5r Functional Characterization and Structural Basis of an Efficient Di-C-glycosyltransferase fromGlycyrrhiza glabra.
Resolution2.89 Å
Binding residue
(original residue number in PDB)		F92 M123 T124 M150 F199 G389 D390
Binding residue
(residue number reindexed from 1)		F74 M105 T106 M132 F181 G367 D368
Annotation score1
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Feb 23 13:05:36 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6l5r', asym_id = 'A', bs = 'BS02', title = 'Functional Characterization and Structural Basis... Di-C-glycosyltransferase fromGlycyrrhiza glabra.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6l5r', asym_id='A', bs='BS02', title='Functional Characterization and Structural Basis... Di-C-glycosyltransferase fromGlycyrrhiza glabra.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0008194,0035251', uniprot = '', pdbid = '6l5r', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0008194,0035251', uniprot='', pdbid='6l5r', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>