Structure of PDB 6kns Chain A Binding Site BS02

Receptor Information
>6kns Chain A (length=246) Species: 1423 (Bacillus subtilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DPMKVTVIGCYGGFPAANEATSGYLFQSGDYSLLVDCGSAVLSKLFGYVP
AEKLDAVILSHYHHDHIADIGPLQFAKQVGSFLGKGEHTLPIYGHDADIE
QFQKLTYKTHTKGIAFQPDQPLTAGPFTITFLKTIHPVTCYAMRITDGSH
TVVYTADSSYQDSFIPFSENADLLISECNFYADQDGTSAGHMNSLEAGRI
AKEAGAGELLLTHLPHFGVHDNLRKEAKTVFSGEVNIAKSGFVWEG
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6kns Chain A Residue 303 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6kns Structural and biochemical analyses of the metallo-beta-lactamase fold protein YhfI from Bacillus subtilis.
Resolution2.15 Å
Binding residue
(original residue number in PDB)		D63 H64 D155 H211
Binding residue
(residue number reindexed from 1)		D65 H66 D157 H213
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0042781 3'-tRNA processing endoribonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0042780 tRNA 3'-end processing

View graph for
Molecular Function
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Biological Process
External links
PDB RCSB:6kns, PDBe:6kns, PDBj:6kns
PDBsum6kns
PubMed31481231
UniProtE0TYN8

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