Structure of PDB 6je3 Chain A Binding Site BS02

Receptor Information
>6je3 Chain A (length=858) Species: 487 (Neisseria meningitidis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NPINYILGLAIGIASVGWAMVEIDEEENPIRLIDLGVRVFERAEVPKTGD
SLAMARRLARSVRRLTRRRAHRLLRARRLLKREGVLQAADFDENGLIKSL
PNTPWQLRAAALDRKLTPLEWSAVLLHLIKHRGYLSQRKKELGALLKGVA
NNAHALQTGDFRTPAELALNKFEKESGHIRNQRGDYSHTFSRKDLQAELI
LLFEKQKEFGNPHVSGGLKEGIETLLMTQRPALSGDAVQKMLGHCTFEPA
EPKAAKNTYTAERFIWLTKLNNLRILEQPLTDTERATLMDEPYRKSKLTY
AQARKLLGLEDTAFFKGLRYGKDNAEASTLMEMKAYHAISRALEKEGLKD
KKSPLNLSSELQDEIGTAFSLFKTDEDITGRLKDRVQPEILEALLKHISF
DKFVQISLKALRRIVPLMEQGKRYDEACAEIYGDHYTEEKIYLPPIPADE
IRNPVVLRALSQARKVINGVVRRYGSPAIHIETAREVGKSFKDRKEIEFL
CQFVADHILLTGKGKRRVFASNGQITNLLRGENDRHHALDAVVVACTVAM
PWEFFAQEVMIRVFGKPDGKPEFEEADTPEKLRTLLAEKLSSRPEAVHEY
VTPLFVSRAPNRKMSGAHKDTLRSAKRFVKHNEKISVKRVWLTEIKLADL
ENMVNYKNGREIELYEALKARLEAYGGNAKQAFDPKDNPFYKKGGQLVKA
VRVEKTQESGVLLNKKNAYTIADNGDMVRVDVFCKVDKKGKNQYFIVPIY
AWQVAENILPDIDCKGYRIDDSYTFCFSLHKYDLIAFQKDEKSKVEFAYY
INCDSSNGRFYLAWHDKGSKEQQFRISTQNLVLIQKYQVNELGKEIRPCR
LKKRPPVR
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6je3 Structures of Neisseria meningitidis Cas9 Complexes in Catalytically Poised and Anti-CRISPR-Inhibited States.
Resolution2.931 Å
Binding residue
(original residue number in PDB)		Y140 K145 L159 Y199 L246 M254 L255 K266 N285 R287 K333 G334 K390 D418 F420 R440 D442 E471 I472 K843 D844 T845 R1033 T1052 N1054 L1055
Binding residue
(residue number reindexed from 1)		Y134 K139 L146 Y186 L233 M241 L242 K253 N272 R274 K316 G317 K373 D401 F403 R423 D425 E450 I451 K619 D620 T621 R809 T828 N830 L831
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Wed Apr 16 18:50:50 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6je3', asym_id = 'A', bs = 'BS02', title = 'Structures of Neisseria meningitidis Cas9 Comple...ytically Poised and Anti-CRISPR-Inhibited States.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6je3', asym_id='A', bs='BS02', title='Structures of Neisseria meningitidis Cas9 Comple...ytically Poised and Anti-CRISPR-Inhibited States.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003676,0004519', uniprot = '', pdbid = '6je3', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003676,0004519', uniprot='', pdbid='6je3', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>