Structure of PDB 6iv9 Chain A Binding Site BS02

Receptor Information
>6iv9 Chain A (length=874) Species: 165186 (uncultured Ruminococcus sp.) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EKKKSSVKAAGMKSILVSENKMYITSFGKGNSAVLEYEVDNNDYNKTQLS
SKDNSNIELGDVNEVNITFSSKHGFGSGVEINTSNPTHRSGESSPVRGDM
LGLKSELEKRFFGKTFDDNIHIQLIYNILDIEKILAVYVTNIVYALNNML
GIKDSESYDDFMGYLSARNTYEVFTHPDKSNLSDKVKGNIKKSLSKFNDL
LKTKRLGYFGLEEPKTKDTRASEAYKKRVYHMLAIVGQIAQCVFHDKSGA
KRFDLYSFINNIDPEYRDTLDYLVEERLKSINKDFIEGNKVNISLLIDMM
KGYEADDIIRLYYDFIVLKSQKNLGFSIKKLREKMLEEYGFRFKDKQYDS
VRSKMYKLMDFLLFCNYYRNDVAAGEALVRKLRFSMTDDEKEGIYADEAA
KLWGKFRNDFENIADHMNGDVIKELGKADMDFDEKILDSEKKNASDLLYF
SKMIYMLTYFLDGKEINDLLTTLISKFDNIKEFLKIMKSSAVDVECELTA
GYKLFNDSQRITNELFIVKNIASMRKPAASAKLTMFRDALTILGIDDNIT
DDRISEILKLKEKGKGIHGLRNFITNNVIESSRFVYLIKYANAQKIREVA
KNEKVVMFVLGGIPDTQIERYYKSCVEFPDMNSSLEAKRSELARMIKNIS
FDDFKNVKQQAKGRENVAKERAKAVIGLYLTVMYLLVKNLVNVNARYVIA
IHCLERDFGLYKEIIPELASKNLKNDYRILSQTLCELCDDRNESSNLFLK
KNKRLRKCVEVDINNADSSMTRKYANCIAHLTVVRELKEYIGDIRTVDSY
FSIYHYVMQRCITKRGDDTKQEEKIKYEDDLLKNHGYTKDFVKALNSPFG
YNIPRFKNLSIEQLFDRNEYLTEK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6iv9 Chain A Residue 1001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6iv9 Two HEPN domains dictate CRISPR RNA maturation and target cleavage in Cas13d.
Resolution1.86 Å
Binding residue
(original residue number in PDB)		R137 E140
Binding residue
(residue number reindexed from 1)		R89 E92
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6iv9, PDBe:6iv9, PDBj:6iv9
PDBsum6iv9
PubMed31186424
UniProtA0A1C5SD84

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