Structure of PDB 6i0n Chain A Binding Site BS02

Receptor Information
>6i0n Chain A (length=77) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GLYLQVGAFANPDAAELLKAKLSGVTAAPVFISSVVRNQQILHRVRLGPI
GSADEVSRTQDSIRVANLGQPTLVRPD
Ligand information
Ligand IDAH0
InChIInChI=1S/C11H17NO7/c1-4(10(15)16)18-9-7(12-5(2)13)11-17-3-6(19-11)8(9)14/h4,6-9,11,14H,3H2,1-2H3,(H,12,13)(H,15,16)/t4-,6-,7-,8-,9-,11-/m1/s1
InChIKeyZFEGYUMHFZOYIY-YVNCZSHWSA-N
SMILES
SoftwareSMILES
CACTVS 3.341C[CH](O[CH]1[CH](O)[CH]2CO[CH](O2)[CH]1NC(C)=O)C(O)=O
CACTVS 3.341C[C@@H](O[C@H]1[C@H](O)[C@H]2CO[C@H](O2)[C@@H]1NC(C)=O)C(O)=O
OpenEye OEToolkits 1.5.0CC(C(=O)O)OC1C(C2OCC(C1O)O2)NC(=O)C
OpenEye OEToolkits 1.5.0C[C@H](C(=O)O)O[C@@H]1[C@H]([C@@H]2OC[C@H]([C@H]1O)O2)NC(=O)C
ACDLabs 10.04O=C(O)C(OC2C(O)C1OC(OC1)C2NC(=O)C)C
FormulaC11 H17 N O7
Name2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACID;
1,6-anhydro-N-acetylmuramic acid
ChEMBL
DrugBank
ZINCZINC000034118661
PDB chain6i0n Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6i0n Structural basis of denuded glycan recognition by SPOR domains in bacterial cell division.
Resolution1.4 Å
Binding residue
(original residue number in PDB)		Q270 R302
Binding residue
(residue number reindexed from 1)		Q5 R37
Annotation score1
Enzymatic activity
Enzyme Commision number 4.2.2.-
Gene Ontology
Molecular Function
GO:0042834 peptidoglycan binding

View graph for
Molecular Function
External links
PDB RCSB:6i0n, PDBe:6i0n, PDBj:6i0n
PDBsum6i0n
PubMed31804467
UniProtQ9X6V6|RLPA_PSEAE Endolytic peptidoglycan transglycosylase RlpA (Gene Name=rlpA)

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