Structure of PDB 6hus Chain A Binding Site BS02
Receptor Information
>6hus Chain A (length=428) Species:
1682
(Bifidobacterium longum subsp. infantis) [
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KSDVTAQDVENALTDTSKNVELTVWAYSAKQMEPTVKAFEKKYPHIKINF
VNTGAAEDHFTKFQNVVQAQKDIPDVVQMSANKFQQFAVSGALLNFANDS
IEKAWSKLYTKTAWAQVHYAGGLYGAPQDATPLANYVRKDILDEHNLQVP
ESWEDIYNEGIKLHKEDSNKYMGILGSDISFFTNLYRSVGARLWKVNSVD
DVELTMNSGKAKEFTEFLQKCLKDGVLEGGTVFTDEFNRSINDGRYATFI
NENWMGNTYKEQNPSLKGKMVVAAPPSWKGQPYQSSSVGSMMSVSAACPK
EKQAAALAFINWLDSDKDAIQSWQDTNNGNFFMAASVYQDDENQRNKKET
DGYYANDDVNAVYFDSMDKVNTDWEYLPFMSQVEVVFNDVIVPEMNENGD
LVGAMAKAQQKLKAYAEDNGFKVTTDAD
Ligand information
Ligand ID
FUC
InChI
InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3+,4+,5-,6+/m0/s1
InChIKey
SHZGCJCMOBCMKK-SXUWKVJYSA-N
SMILES
Software
SMILES
CACTVS 3.341
C[C@@H]1O[C@@H](O)[C@@H](O)[C@H](O)[C@@H]1O
ACDLabs 10.04
OC1C(O)C(OC(O)C1O)C
OpenEye OEToolkits 1.5.0
CC1C(C(C(C(O1)O)O)O)O
OpenEye OEToolkits 1.5.0
C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O)O)O)O
CACTVS 3.341
C[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
Formula
C6 H12 O5
Name
alpha-L-fucopyranose;
alpha-L-fucose;
6-deoxy-alpha-L-galactopyranose;
L-fucose;
fucose
ChEMBL
CHEMBL1232862
DrugBank
DB04473
ZINC
ZINC000001532814
PDB chain
6hus Chain B Residue 2 [
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Receptor-Ligand Complex Structure
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PDB
6hus
Evolutionary adaptation in fucosyllactose uptake systems supports bifidobacteria-infant symbiosis.
Resolution
1.409 Å
Binding residue
(original residue number in PDB)
Y59 S112 S212 E284 V320 G321
Binding residue
(residue number reindexed from 1)
Y27 S80 S180 E252 V288 G289
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0046872
metal ion binding
GO:1901982
maltose binding
Biological Process
GO:0015768
maltose transport
GO:0042956
maltodextrin transmembrane transport
Cellular Component
GO:0055052
ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:6hus
,
PDBe:6hus
,
PDBj:6hus
PDBsum
6hus
PubMed
31489370
UniProt
A0A1S2VYK0
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