Structure of PDB 6fzd Chain A Binding Site BS02

Receptor Information

>6fzd Chain A (length=392) Species: 1422 (Geobacillus stearothermophilus)

SRANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLA
VGPLSSNWDRACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELK
RGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGH
HFVLSVTTIATPHDGTTLVNMVDFTDRFFDFQKFVLKAAAVASNVPYTSQ
VYDFKLDQWGLRRQPGESFDQYFERLKRSPVWTSTDTARYDLSVPGAEKL
NQWVKASPNTYYLSFATERTYRGALTGNYYPELGMNAFSAVVCAPFLGSY
RNATLGIDDRWLENDGIVNAFSMNGPKRGSTDRIVPYDGTIKKGVWNDMG
TYNVDHFEVIGVDPNPLFDIRAFYLRLAEQLASLQPHHHHHH

Ligand information

• Ligand ID: CA
• InChI: InChI=1S/Ca/q+2
• InChIKey: BHPQYMZQTOCNFJ-UHFFFAOYSA-N
• SMILES:
  CACTVS 3.341: [Ca++]
  ACDLabs 10.04
  OpenEye OEToolkits 1.5.0: [Ca+2]
• Formula: Ca
• Name: CALCIUM ION
• DrugBank: DB14577
• PDB chain: 6fzd Chain A Residue 402

Receptor-Ligand Complex Structure

Structure summary

• PDB: 6fzd Filling the Void: Introducing Aromatic Interactions into Solvent Tunnels To Enhance Lipase Stability in Methanol.
• Resolution: 1.8 Å
• Binding residue (original residue number in PDB): G287 E361 D366 P367
• Binding residue (residue number reindexed from 1): G284 E358 D363 P364
• Annotation score: 1

Enzymatic activity

• Enzyme Commision number: 3.1.1.3: triacylglycerol lipase.

Gene Ontology

Molecular Function

• GO:0004806 triacylglycerol lipase activity
• GO:0016787 hydrolase activity
• GO:0046872 metal ion binding

Biological Process

• GO:0016042 lipid catabolic process

Cellular Component

• GO:0005576 extracellular region

External links

• PDB: RCSB:6fzd, PDBe:6fzd, PDBj:6fzd
• PDBsum: 6fzd
• PubMed: 30217852
• UniProt: Q93A71