Structure of PDB 6fyc Chain A Binding Site BS02

Receptor Information

>6fyc Chain A (length=453) Species: 115828 (Streptomyces maritimus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

QLDPATLAAFSAAFRGELIWPSDADYDEARRIWNGTIDRRPALIARCTST
PDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSIKVSR
RLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGMVLGGGFGWLS
RKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVRGGGGNFGVVTAF
EFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAP
PLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLP
YRALQAYSFPDRIYTKSGYLNELSDEATDTVLEHAADIASPFTQLELLYL
GGAVARVPDDATAYPNRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALA
GHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLFRLNQNI
PPS

Ligand information

InChI=1S/O2/c1-2

MYMOFIZGZYHOMD-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341 OpenEye OEToolkits 1.5.0	O=O

Formula

Name

OXYGEN MOLECULE

PDB chain

6fyc Chain A Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	6fyc Enzymatic control of dioxygen binding and functionalization of the flavin cofactor.
Resolution	2.0 Å
Binding residue (original residue number in PDB)	G134 V135 V136 T139
Binding residue (residue number reindexed from 1)	G130 V131 V132 T135
Annotation score	4

Enzymatic activity

Catalytic site (original residue number in PDB)	H78 S137 T245
Catalytic site (residue number reindexed from 1)	H74 S133 T241
Enzyme Commision number	?

Gene Ontology

	Molecular Function
GO:0016491	oxidoreductase activity
GO:0042802	identical protein binding
GO:0050660	flavin adenine dinucleotide binding
GO:0071949	FAD binding

View graph for
Molecular Function

External links

PDB	RCSB:6fyc, PDBe:6fyc, PDBj:6fyc
PDBsum	6fyc
PubMed	29686059
UniProt	Q9KHK2

[Back to BioLiP]