Structure of PDB 6f6m Chain A Binding Site BS02

Receptor Information
>6f6m Chain A (length=272) Species: 235909 (Geobacillus kaustophilus HTA426) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HHDGFQTVKATIDWEHPMFKLYEKAKRNGKWNPADIDFSQDQKDFASLTS
EEKISALPLVAGFSAGEEAVTLDILPMAHALARQGRLEDVLFLTTFMHDE
AKHVEMFSRWQQAVGIGQMDLSVFHNDHYKRIFYEALPEAMNRLYADDSP
EAVIRAATVFNMIVEGTLAESGYYTFRQIYKKAGLFPGLLQGIDYLNMDE
GRHIQFGIYTIQRIVNEDERYYELFIRYMDELWPHVIGYVDYLTELGKID
YDLLRHYVIKQFNLRKKQISRT
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain6f6m Chain A Residue 403 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6f6m Assembly of a heterodinuclear Mn/Fe cofactor is coupled to tyrosine-valine ether cross-link formation in the R2-like ligand-binding oxidase.
Resolution1.393 Å
Binding residue
(original residue number in PDB)		E69 E102 H105 E202
Binding residue
(residue number reindexed from 1)		E67 E100 H103 E200
Annotation score1
Enzymatic activity
Enzyme Commision number 1.17.4.1: ribonucleoside-diphosphate reductase.
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0009263 deoxyribonucleotide biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6f6m, PDBe:6f6m, PDBj:6f6m
PDBsum6f6m
PubMed30689052
UniProtQ5KW80

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