Structure of PDB 6euh Chain A Binding Site BS02

Receptor Information

>6euh Chain A (length=345) Species: 226186 (Bacteroides thetaiotaomicron VPI-5482) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

IASGKVWRDTDGNVINAHGGGILFHEGKYYWFGEHRPASGFVTEKGINCY
SSTDLYNWKSEGIALAVSEEEGHDIEKGCIMERPKVIYNAKTGKFVMWLH
LELKGQGYGPARAAVAVSDSPAGPYRFIRSGRVNPGAYPLNMTRKERKMK
WNPEEYKEWWTPKWYEAIAKGMFVKRDLKDGQMSRDMTLFVDDDGKAYHI
YSSEDNLTLQIAELADDYLSHTGKYIRIFPGGHNEAPAIFKKEGTYWMIT
SGCTGWDPNKARLLTADSMLGEWKQLPNPCVGEDADKTFGGQSTYILPLP
EKGQFFFMADMWRPKSLADSRYIWLPVQFDDKGVPFIKWMDRWNF

Ligand information

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

6euh Chain A Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6euh A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation.
Resolution	2.0 Å
Binding residue (original residue number in PDB)	N211 L212 T213 L214 H238 N239
Binding residue (residue number reindexed from 1)	N206 L207 T208 L209 H233 N234
Annotation score	4

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

	Biological Process
GO:0005975	carbohydrate metabolic process

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Molecular Function

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Biological Process

External links

PDB	RCSB:6euh, PDBe:6euh, PDBj:6euh
PDBsum	6euh
PubMed	30349080
UniProt	Q8A1H8

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