Structure of PDB 6eko Chain A Binding Site BS02
Receptor Information
>6eko Chain A (length=312) Species:
294
(Pseudomonas fluorescens) [
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MQKYRLYEKDGSPVQDFNRFVKGWLDIEFGLKEHQPPKVFDTIRDKYNEA
IEAVVLSGVAPRTAHKAALSTLTELLFGHDLAKELSARLDIQPIGVGGFR
SAHSQAFAKNVGENFVNLMVYALACILKDNDDVLVDKGLPPHLKKALTLS
RECRIKDTLREIKIPIEGDLCVFSRSNHMNAIVISAATRLKEVFHIGTMW
ALFSDVAKDEYCLNKWGLKVESSESLKDTMYVFATADMINKDGARSQGCD
VERETPRNLIAMDASFFDYVFVSKMGIGHVSSDLSLKYGRESLFHELGCI
IDMIEQKFDILL
Ligand information
>6eko Chain E (length=14) [
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cgctcccggagcgt
Receptor-Ligand Complex Structure
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PDB
6eko
Unique mechanism of target recognition by PfoI restriction endonuclease of the CCGG-family.
Resolution
2.284 Å
Binding residue
(original residue number in PDB)
H34 Q35 P37 K38 R88 I94 G97 G98 F99 R100 A102 Q105 A106 K109 N110 E192 H195 R253 R257 N258 L259
Binding residue
(residue number reindexed from 1)
H34 Q35 P37 K38 R88 I94 G97 G98 F99 R100 A102 Q105 A106 K109 N110 E192 H195 R253 R257 N258 L259
Enzymatic activity
Enzyme Commision number
3.1.21.4
: type II site-specific deoxyribonuclease.
Gene Ontology
Molecular Function
GO:0009036
type II site-specific deoxyribonuclease activity
GO:0046872
metal ion binding
Biological Process
GO:0006259
DNA metabolic process
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Molecular Function
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Biological Process
External links
PDB
RCSB:6eko
,
PDBe:6eko
,
PDBj:6eko
PDBsum
6eko
PubMed
30445642
UniProt
A0A452CST9
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