Structure of PDB 6ejw Chain A Binding Site BS02
Receptor Information
>6ejw Chain A (length=101) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTR
VRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVL
L
Ligand information
Ligand ID
IAC
InChI
InChI=1S/C10H9NO2/c12-10(13)5-7-6-11-9-4-2-1-3-8(7)9/h1-4,6,11H,5H2,(H,12,13)
InChIKey
SEOVTRFCIGRIMH-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
c1ccc2c(c1)c(c[nH]2)CC(=O)O
ACDLabs 12.01
O=C(O)Cc2c1ccccc1nc2
CACTVS 3.370
OC(=O)Cc1c[nH]c2ccccc12
Formula
C10 H9 N O2
Name
1H-INDOL-3-YLACETIC ACID;
INDOLE ACETIC ACID
ChEMBL
CHEMBL82411
DrugBank
DB07950
ZINC
ZINC000000083860
PDB chain
6ejw Chain A Residue 202 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6ejw
Auxin Sensor based on the Tryptophan Repressor TrpR
Resolution
1.99 Å
Binding residue
(original residue number in PDB)
S8 A9
Binding residue
(residue number reindexed from 1)
S4 A5
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0045892
negative regulation of DNA-templated transcription
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6ejw
,
PDBe:6ejw
,
PDBj:6ejw
PDBsum
6ejw
PubMed
UniProt
P0A881
|TRPR_ECOLI Trp operon repressor (Gene Name=trpR)
[
Back to BioLiP
]