Structure of PDB 6e17 Chain A Binding Site BS02
Receptor Information
>6e17 Chain A (length=157) Species:
153948
(Nitrosomonas sp. AL212) [
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NYGSFTKEHVLLTPKGYREWVFIGASVTPNELNDDKAAFPEFHNVYIDPT
SWGHWKKTGEFRDGTVIVKELAGVGSKASPSGNGYFPGEFNGIEAMVKDS
KRYPERPGNWAFFGFESYEAKQGIIQTDETCAACHKEHAAHDMVFTQFYP
VLRAGKP
Ligand information
Ligand ID
HEC
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,9-12H2,1-6H3,(H,39,40)(H,41,42);/q-4;+4/b21-7?,22-8?,26-13-,29-14-,30-15-,31-16-;
InChIKey
HXQIYSLZKNYNMH-LJNAALQVSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)CCC1=C(C2=CC6=C(C(=C/C)\C5=CC4=C(C(\C3=Cc7c(c(c8C=C1N2[Fe](N34)(N56)n78)CCC(=O)O)C)=C/C)C)C)C
OpenEye OEToolkits 1.5.0
CC=C1C(=C2C=C3C(=CC)C(=C4N3[Fe]56N2C1=Cc7n5c(c(c7C)CCC(=O)O)C=C8N6C(=C4)C(=C8CCC(=O)O)C)C)C
CACTVS 3.341
C\C=C1/C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)\C7=C/C)C=C1N2[Fe@@]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
CACTVS 3.341
CC=C1C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)C7=CC)C=C1N2[Fe]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
Formula
C34 H34 Fe N4 O4
Name
HEME C
ChEMBL
DrugBank
ZINC
PDB chain
6e17 Chain B Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
6e17
Controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome P460.
Resolution
1.97 Å
Binding residue
(original residue number in PDB)
P117 S118 F123
Binding residue
(residue number reindexed from 1)
P80 S81 F86
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:6e17
,
PDBe:6e17
,
PDBj:6e17
PDBsum
6e17
PubMed
31015919
UniProt
F9ZFJ0
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