Structure of PDB 6doi Chain A Binding Site BS02
Receptor Information
>6doi Chain A (length=133) Species:
272558
(Halalkalibacterium halodurans C-125) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
EEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEF
LAIVHGLRYLKERNSRKPIYSDSQTAIKWVKDKKAKSTLVRNEETALIWK
LVDEAEEWLNTHTYETPILKWQTDKWGEIKADY
Ligand information
>6doi Chain b (length=2) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cg
..
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6doi
Cation trafficking propels RNA hydrolysis.
Resolution
1.948 Å
Binding residue
(original residue number in PDB)
G73 S74 G76 N105
Binding residue
(residue number reindexed from 1)
G13 S14 G16 N45
Enzymatic activity
Enzyme Commision number
3.1.26.4
: ribonuclease H.
Gene Ontology
Molecular Function
GO:0003676
nucleic acid binding
GO:0004523
RNA-DNA hybrid ribonuclease activity
View graph for
Molecular Function
External links
PDB
RCSB:6doi
,
PDBe:6doi
,
PDBj:6doi
PDBsum
6doi
PubMed
30076410
UniProt
Q9KEI9
|RNH1_HALH5 Ribonuclease H (Gene Name=rnhA)
[
Back to BioLiP
]