Structure of PDB 6crm Chain A Binding Site BS02

Receptor Information
>6crm Chain A (length=512) Species: 290339 (Cronobacter sakazakii ATCC BAA-894) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EVYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKS
LCYQIPALVKTGLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQSREEQ
QAVLAGCRTGQVRLLYIAPERLMMDNFIDTLGYWDLAMVAVDEAHCISQW
GHDFRPEYAALGQLRARFPAVPFMALTATADDTTRRDIVRLLGLDDPLIE
ISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAA
RLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGINKPN
VRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEE
KAPGPLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQAPCGNCDICL
DPPRRYDGLVDAQKALSAIARVEQRFGMGYVVEVLRGANNQRIRELGHDK
LKVYGIGRDQSQEHWVSVIRQLIHLGVVTQNIAQHSALQLTEAARPFLRG
EAPLMLAVPRVA
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6crm Chain A Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6crm A guanine-flipping and sequestration mechanism for G-quadruplex unwinding by RecQ helicases.
Resolution2.19286 Å
Binding residue
(original residue number in PDB)
C380 C397 C400 C403
Binding residue
(residue number reindexed from 1)
C376 C393 C396 C399
Annotation score1
Enzymatic activity
Enzyme Commision number 5.6.2.4: DNA 3'-5' helicase.
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003678 DNA helicase activity
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0043138 3'-5' DNA helicase activity
Biological Process
GO:0006260 DNA replication
GO:0006281 DNA repair
GO:0006310 DNA recombination
GO:0009432 SOS response

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Molecular Function

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Biological Process
External links
PDB RCSB:6crm, PDBe:6crm, PDBj:6crm
PDBsum6crm
PubMed30305632
UniProtA7MQK9

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