Structure of PDB 5zxd Chain A Binding Site BS02
Receptor Information
>5zxd Chain A (length=464) Species:
9606
(Homo sapiens) [
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NASDIKLEKFSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHI
ANRALSIPPNIDVLLCEQEVVADETPAVQAVGAAAAEAKARRILAGLGFD
PEMQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLN
NYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDAQRLHYYRGNYMTFKKMYQ
QKQKELLKQYEKQEKKLKELKAGELLKRPKEYTVRFTFPDPPPLSPPVLG
LHGVTFGYQGQKPLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLT
PTHGEMRKNHRLKIGFFNQQYAEQLRMEETPTEYLQRGFNLPYQDARKCL
GRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIE
SIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFED
YKREVLEALGEVMV
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
5zxd Chain A Residue 602 [
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Receptor-Ligand Complex Structure
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PDB
5zxd
Crystal Structure of ATP-Bound Human ABCF1 Demonstrates a Unique Conformation of ABC Proteins
Resolution
2.288 Å
Binding residue
(original residue number in PDB)
Y336 N362 G363 G365 K366 S367 T368 D469
Binding residue
(residue number reindexed from 1)
Y258 N284 G285 G287 K288 S289 T290 D391
Annotation score
5
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
View graph for
Molecular Function
External links
PDB
RCSB:5zxd
,
PDBe:5zxd
,
PDBj:5zxd
PDBsum
5zxd
PubMed
30017566
UniProt
Q8NE71
|ABCF1_HUMAN ATP-binding cassette sub-family F member 1 (Gene Name=ABCF1)
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