Structure of PDB 5zjs Chain A Binding Site BS02
Receptor Information
>5zjs Chain A (length=58) Species:
7227
(Drosophila melanogaster) [
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WKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQN
RRMKNKKN
Ligand information
>5zjs Chain D (length=14) [
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gcatgattaatgac
Receptor-Ligand Complex Structure
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PDB
5zjs
Intrinsic DNA Shape Accounts for Affinity Differences between Hox-Cofactor Binding Sites.
Resolution
2.896 Å
Binding residue
(original residue number in PDB)
K21 R23 Y26 R61 I65 N69 K73
Binding residue
(residue number reindexed from 1)
K2 R4 Y7 R42 I46 N50 K54
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000981
DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677
DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
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Molecular Function
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Biological Process
External links
PDB
RCSB:5zjs
,
PDBe:5zjs
,
PDBj:5zjs
PDBsum
5zjs
PubMed
30157419
UniProt
P09087
|ABDB_DROME Homeobox protein abdominal-B (Gene Name=Abd-B)
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