Structure of PDB 5zcw Chain A Binding Site BS02

Receptor Information
>5zcw Chain A (length=459) Species: 2209 (Methanosarcina mazei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PRGSHMNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEA
NVPVVVVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDP
GEKISRFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVV
PCWEASQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTPEMVETLSDV
LETGVKALLPERALLKNKDPLFEPWHFEPGEKAAKKVMESFIADRLDSYG
ALRNDPTKNMLSNLSPYLHFGQISSQRVVLEVEKAESNPGSKKAFLDEIL
IWKEISDNFCYYNPGYDGFESFPSWAKESLNAHRNDVRSHIYTLEEFEAG
KTHDPLWNASQMELLSTGKMHGYTRMYWAKKILEWSESPEKALEIAICLN
DRYELDGRDPNGYAGIAWSIGGVHDRAWGEREVTGKIRYMSYEGCKRKFD
VKLYIEKYS
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5zcw Twist and turn: a revised structural view on the unpaired bubble of class II CPD photolyase in complex with damaged DNA.
Resolution2.7 Å
Binding residue
(original residue number in PDB)		Y158 W328 R429 W431 K439
Binding residue
(residue number reindexed from 1)		Y161 W325 R426 W428 K436
Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:5zcw, PDBe:5zcw, PDBj:5zcw
PDBsum5zcw
PubMed30224964
UniProtQ8PYK9

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