Structure of PDB 5yvx Chain A Binding Site BS02

Receptor Information
>5yvx Chain A (length=60) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ESAWVRCDDCFKWRRIPASVVGSIDESSRWICMNNSDKRFADCSKSQEMS
NEEINAELGI
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5yvx Chain A Residue 1001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5yvx Uncovering the mechanistic basis for specific recognition of monomethylated H3K4 by the CW domain ofArabidopsishistone methyltransferase SDG8.
Resolution1.591 Å
Binding residue
(original residue number in PDB)		C868 C871 C893 C904
Binding residue
(residue number reindexed from 1)		C7 C10 C32 C43
Annotation score1
Enzymatic activity
Enzyme Commision number 2.1.1.-
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:5yvx, PDBe:5yvx, PDBj:5yvx
PDBsum5yvx
PubMed29496997
UniProtQ2LAE1|ASHH2_ARATH Histone-lysine N-methyltransferase ASHH2 (Gene Name=ASHH2)

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