Structure of PDB 5yjs Chain A Binding Site BS02

Receptor Information
>5yjs Chain A (length=370) Species: 4072 (Capsicum annuum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NPYLFESAGFASAFRTGEGHLKILEKFTQRSELFRGIEKYRVAVLEFEPQ
SFMVPNHCDGEVIYVVAKGAGIISIAEQKAKYYFVLKKADVKRVPAGATI
YFVNRDANQKLVVYVLVKSTNAPGEAQEYFSGGGQNPESFYRAFSSDILE
KAFNTAADRLERLFGQQKQGPVIKASEEQIRAISQYASEPTAATGGEIRG
PFNLLKGAPLFESRFGQFFEASPELFAQLRDLDVAVGYMNINQGGMVLPY
YNTKSTRLVMVIEGNGRFEMACPHAGDVHYQKVRGNLNVGDLLVVPAAHP
ITFTATGGSNLRMVGFGINAQNNKKKFLAGKQNIWRNVDREAKELSFNMP
GREVEEIFQKQDESYFVAGP
Ligand information
Ligand IDCU1
InChIInChI=1S/Cu/q+1
InChIKeyVMQMZMRVKUZKQL-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Cu+]
FormulaCu
NameCOPPER (I) ION
ChEMBL
DrugBank
ZINC
PDB chain5yjs Chain A Residue 604 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5yjs Structure-guided identification of function: role ofCapsicum annuumvicilin during oxidative stress.
Resolution2.16 Å
Binding residue
(original residue number in PDB)
C417 H419 H464
Binding residue
(residue number reindexed from 1)
C272 H274 H299
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5yjs, PDBe:5yjs, PDBj:5yjs
PDBsum5yjs
PubMed30181145
UniProtA0A452CSM5

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