Structure of PDB 5yjs Chain A Binding Site BS02
Receptor Information
>5yjs Chain A (length=370) Species:
4072
(Capsicum annuum) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NPYLFESAGFASAFRTGEGHLKILEKFTQRSELFRGIEKYRVAVLEFEPQ
SFMVPNHCDGEVIYVVAKGAGIISIAEQKAKYYFVLKKADVKRVPAGATI
YFVNRDANQKLVVYVLVKSTNAPGEAQEYFSGGGQNPESFYRAFSSDILE
KAFNTAADRLERLFGQQKQGPVIKASEEQIRAISQYASEPTAATGGEIRG
PFNLLKGAPLFESRFGQFFEASPELFAQLRDLDVAVGYMNINQGGMVLPY
YNTKSTRLVMVIEGNGRFEMACPHAGDVHYQKVRGNLNVGDLLVVPAAHP
ITFTATGGSNLRMVGFGINAQNNKKKFLAGKQNIWRNVDREAKELSFNMP
GREVEEIFQKQDESYFVAGP
Ligand information
Ligand ID
CU1
InChI
InChI=1S/Cu/q+1
InChIKey
VMQMZMRVKUZKQL-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0
[Cu+]
Formula
Cu
Name
COPPER (I) ION
ChEMBL
DrugBank
ZINC
PDB chain
5yjs Chain A Residue 604 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5yjs
Structure-guided identification of function: role ofCapsicum annuumvicilin during oxidative stress.
Resolution
2.16 Å
Binding residue
(original residue number in PDB)
C417 H419 H464
Binding residue
(residue number reindexed from 1)
C272 H274 H299
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0046872
metal ion binding
View graph for
Molecular Function
External links
PDB
RCSB:5yjs
,
PDBe:5yjs
,
PDBj:5yjs
PDBsum
5yjs
PubMed
30181145
UniProt
A0A452CSM5
[
Back to BioLiP
]