Structure of PDB 5yha Chain A Binding Site BS02

Receptor Information
>5yha Chain A (length=247) Species: 110829 (Bombyx mori cypovirus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ADVAGTSNRDFRGREQRLFNSEQYNYNNSLNGEVSVWVYAYYSDGSVLVI
NKNSQYKVGISETFKALKEYREGQHNDSYDEYEVNQSIYYPNGGDARKFH
SNAKPRAIQIIFSPSVNVRTIKMAKGNAVSVPDEYLQRSHPWEATGIKYR
KIKRDGEIVGYSHYFELPHEYNSISLAVSGVHKNPSSYNVGSAHNVMDVF
QSCDLALRFCNRYWAELELVNHYISPNAYPYLDINNHSYGVALSNRQ
Ligand information
Ligand IDPLL
InChIInChI=1S/C3H5.Pd/c1-3-2;/h3H,1-2H2;
InChIKeyWTWGCTVOVPTEEU-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385[Pd].CCC
OpenEye OEToolkits 2.0.7C1C2[Pd]1C2
ACDLabs 10.04[Pd]21CC1C2
FormulaC3 H5 Pd
NamePalladium(II) allyl complex
ChEMBL
DrugBank
ZINC
PDB chain5yha Chain A Residue 304 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5yha Structure of in cell protein crystals containing organometallic complexes.
Resolution1.58 Å
Binding residue
(original residue number in PDB)		R155 H238 S239
Binding residue
(residue number reindexed from 1)		R154 H237 S238
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5yha, PDBe:5yha, PDBj:5yha
PDBsum5yha
PubMed29138769
UniProtP11041|PYHD_CPVBM Polyhedrin

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