Structure of PDB 5ybl Chain A Binding Site BS02
Receptor Information
>5ybl Chain A (length=272) Species:
227321
(Aspergillus nidulans FGSC A4) [
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LQKFPATAPADEIYAAFKEDGCVIIEGFVPPDQMARFSQEIQPAMEKIQV
QVTNSNDRVKRFSKLVTTSPTFRHEILENDLMHELLQRVFSKPGEGMGYH
FNDTMVIEVQPGAPAQRLHRDQELYPWWNSMGPDAPECLVNFFCAVTPFT
VENGATRLVPGSNRWPELTLIDCPQYDSVPAIMQPGDCYMMSGKVIHGAG
HNATLSDQRRALAFSTIRRELRPVQAFPLWIPMQIATELSPRTQAMFGFR
SSVHFWGNDGKDIGEHLGLISS
Ligand information
Ligand ID
AKG
InChI
InChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)
InChIKey
KPGXRSRHYNQIFN-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)C(=O)CCC(=O)O
OpenEye OEToolkits 1.7.6
C(CC(=O)O)C(=O)C(=O)O
CACTVS 3.385
OC(=O)CCC(=O)C(O)=O
Formula
C5 H6 O5
Name
2-OXOGLUTARIC ACID
ChEMBL
CHEMBL1686
DrugBank
DB08845
ZINC
ZINC000001532519
PDB chain
5ybl Chain A Residue 302 [
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Receptor-Ligand Complex Structure
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PDB
5ybl
Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
Resolution
2.108 Å
Binding residue
(original residue number in PDB)
H130 F154 T167 H214 A216 R226
Binding residue
(residue number reindexed from 1)
H119 F143 T156 H197 A199 R209
Annotation score
5
Enzymatic activity
Enzyme Commision number
1.14.11.-
Gene Ontology
Molecular Function
GO:0046872
metal ion binding
GO:0051213
dioxygenase activity
Biological Process
GO:0016114
terpenoid biosynthetic process
GO:1900560
austinol biosynthetic process
GO:1900563
dehydroaustinol biosynthetic process
Cellular Component
GO:0005575
cellular_component
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:5ybl
,
PDBe:5ybl
,
PDBj:5ybl
PDBsum
5ybl
PubMed
29317628
UniProt
Q5AR34
|AUSE_EMENI Multifunctional dioxygenase ausE (Gene Name=ausE)
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