Structure of PDB 5xc5 Chain A Binding Site BS02

Receptor Information
>5xc5 Chain A (length=167) Species: 212035 (Acanthamoeba polyphaga mimivirus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GYKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKT
LKLNIWDTAGLERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDL
RINCHTTYYILVVANKIDIDKNNWRVSENEIKKFCRDNDCDYVFASSFES
DTVNNLFGKMIDKMSEI
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain5xc5 Chain A Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5xc5 Crystal structures of two forms of the Acanthamoeba polyphaga mimivirus Rab GTPase
Resolution1.398 Å
Binding residue
(original residue number in PDB)		S19 T37
Binding residue
(residue number reindexed from 1)		S15 T33
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) L65
Catalytic site (residue number reindexed from 1) L61
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding

View graph for
Molecular Function
External links
PDB RCSB:5xc5, PDBe:5xc5, PDBj:5xc5
PDBsum5xc5
PubMed28779233
UniProtQ5UQ27|RABL_MIMIV Probable Rab-related GTPase (Gene Name=MIMI_R214)

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