Structure of PDB 5wm1 Chain A Binding Site BS02
Receptor Information
>5wm1 Chain A (length=433) Species:
559292
(Saccharomyces cerevisiae S288C) [
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RIVACDDPDFLTSYFAHSRLHHLSAWKANLKDKFLNENIHKYTKITDKDT
YIIFHIDFDCFFATVAYLCRSSSFSACDFKRDPIVVCHGTKNSDIASCNY
VARSYGIKNGMWVSQAEKMLPNGIKLISLPYTFEQFQLKSEAFYSTLKRL
NIFNLILPISIDEAVCVRIIPDNIHNTNTLNARLCEEIRQEIFQGTNGCT
VSIGCSDSLVLARLALKMAKPNGYNITFKSNLSEEFWSSFKLDDLPGVGH
STLSRLESTFDSPHSLNDLRKRYTLDALKASVGSKLGMKIHLALQGQDDE
ESLKILYDPKEVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLLEKLN
EINKTTSQITLKLMRRCKDAPIEPPKYMGMGRCDSFSRSSRLGIPTNEFG
IIATEMKSLYRTLGCPPMELRGLALQFNKLVDV
Ligand information
>5wm1 Chain T (length=17) [
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catcgctaccacacccc
Receptor-Ligand Complex Structure
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PDB
5wm1
Mechanism of error-free replication across benzo[a]pyrene stereoisomers by Rev1 DNA polymerase.
Resolution
1.85 Å
Binding residue
(original residue number in PDB)
I307 Y319 F320 H322 S323 R324 L325 H326 S329 H393 G394 K396 N397 S398 D399 K590 R620 K621 S622 L623 S624 I625 D626 I627 N628 W629 K681 Y682 M685 G686
Binding residue
(residue number reindexed from 1)
I2 Y14 F15 H17 S18 R19 L20 H21 S24 H88 G89 K91 N92 S93 D94 K285 R315 K316 S317 L318 S319 I320 D321 I322 N323 W324 K376 Y377 M380 G381
Enzymatic activity
Enzyme Commision number
2.7.7.-
Gene Ontology
Molecular Function
GO:0003684
damaged DNA binding
GO:0003887
DNA-directed DNA polymerase activity
Biological Process
GO:0006281
DNA repair
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Molecular Function
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Biological Process
External links
PDB
RCSB:5wm1
,
PDBe:5wm1
,
PDBj:5wm1
PDBsum
5wm1
PubMed
29042535
UniProt
P12689
|REV1_YEAST DNA repair protein REV1 (Gene Name=REV1)
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