Structure of PDB 5vi0 Chain A Binding Site BS02
Receptor Information
>5vi0 Chain A (length=357) Species:
294
(Pseudomonas fluorescens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AAPALKEIFNVERLQHIASEMTAVYPAFDAKGFLKHAKAGLAELSVMQRM
ARVSESLHAVIPLDYPQTLTLLYALAPRLNSGFVSLFLPHYVASYGRDDF
KRSMAALKYFTTFGSAEFAIRHFLLHDFQRTLAVMQAWSQDDNEHVRRLA
SEGSRPRLPWSFRLAEVQADPELCASILDHLKADSSLYVRKSVANHLNDI
TKDHPEWVLSLIEGWNLENPHTAWIARHALRSLIKQGNTRALTLMGAEVK
IHHLMVTPAVINLGERINLSFTLESTAPAPQKLVVDYAIDYVKSTGHGAA
KVFKLKAFSLGAGAQQHIRREQHIRDMTTRKHYPGRHVVHVLVNGERLGS
AEFELRA
Ligand information
>5vi0 Chain F (length=11) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tgtccacgtct
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5vi0
Selective base excision repair of DNA damage by the non-base-flipping DNA glycosylase AlkC.
Resolution
2.396 Å
Binding residue
(original residue number in PDB)
R159 K195 N199 K206 W228 R338 K339
Binding residue
(residue number reindexed from 1)
R155 K191 N195 K202 W224 R330 K331
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:5vi0
,
PDBe:5vi0
,
PDBj:5vi0
PDBsum
5vi0
PubMed
29054852
UniProt
C3K795
[
Back to BioLiP
]