Structure of PDB 5v3g Chain A Binding Site BS02

Receptor Information
>5v3g Chain A (length=168) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLS
HQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFSW
QSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCREC
GRGFRNKSHLLRHQRTHT
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5v3g Structural basis of human PR/SET domain 9 (PRDM9) allele C-specific recognition of its cognate DNA sequence.
Resolution2.416 Å
Binding residue
(original residue number in PDB)
K717 F728 S729 H733 R736 H737 R754 R757 H761 R785 N789 H793 T796 W814 V817 R820 H821 R838 R841 D842 N845 H849 T852 K857 H873 R876 H877
Binding residue
(residue number reindexed from 1)
K3 F14 S15 H19 R22 H23 R40 R43 H47 R71 N75 H79 T82 W100 V103 R106 H107 R124 R127 D128 N131 H135 T138 K143 H159 R162 H163
Enzymatic activity
Enzyme Commision number 2.1.1.43: Transferred entry: 2.1.1.354.
External links