Structure of PDB 5oy7 Chain A Binding Site BS02

Receptor Information
>5oy7 Chain A (length=97) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSS
AVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Ligand information
>5oy7 Chain h (length=619) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gcacaggatgtatatatctgacacgtgcctggagactagggagtaatccc
cttggcggttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtgc
tagagctgtctacgaccaattgagcggcctcggcacgggattctccaggg
agtactgcacaggatgtatatatctgacacgtgcctggagactagggagt
aatccccttggcggttaaaacgcgggggacagcgcgtacgtgcgtttaag
cggtgctagagctgtctacgaccaattgagcggcctcggcccgggattct
ccagggagtactgcacaggatgtatatatctgacacgtgcctggagacta
gggagtaatccccttggcggttaaaacgcgggggacagcgcgtacgtgcg
tttaagcggtgctagagctgtctacgaccaattgagcggcctcggcacgg
gattctccagggagtactgcacaggatgtatatatctgacacgtgcctgg
agactagggagtaatccccttggcggttaaaacgcgggggacagcgcgta
cgtgcgtttaagcggtgctagagctgtctacgaccaattgagcggcctcg
gcaccgggattctccaggg
Receptor-Ligand Complex Structure
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PDB5oy7 Capturing Structural Heterogeneity in Chromatin Fibers.
Resolution5.774 Å
Binding residue
(original residue number in PDB)		R40 Y41 G44 T45 V46 R49 R63 K64 L65 P66 R69 R83
Binding residue
(residue number reindexed from 1)		R3 Y4 G7 T8 V9 R12 R26 K27 L28 P29 R32 R46
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:5oy7, PDBe:5oy7, PDBj:5oy7
PDBsum5oy7
PubMed28893533
UniProtP84233|H32_XENLA Histone H3.2

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