Structure of PDB 5opj Chain A Binding Site BS02

Receptor Information
>5opj Chain A (length=772) Species: 818 (Bacteroides thetaiotaomicron) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLSAPFLREAGLTPK
APSYTNWENTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELHRA
QQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKWVPLYNIHKTYAG
LRDAYLYAHSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNET
FADVAEITGDKKYLKLARRFSHKVILDPLIKNEDRLNGMHANTQIPKVIG
YKRVAEVSKNDKDWNHAAEWDHAARFFWNTVVNHRSVCIGGNSVREHFHP
SDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDNSNKPDPRYVDYY
ERALYNHILSSQEPDKGGFVYFTPMRPGHYRVYSQPETSMWCCVGSGLEN
HTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTLR
IDKAAKKNLTLMIRIPEWAYEITINGKKHLSDIQTGASTYLPIRRKWKKG
DMITFHLPMKVSLEQIPDKKDYYAFLYGPIVLATSTGTENLDGIYADDSR
GGHIAHGRQTPLQEIPMLIGNPDSIRHSLHKLSGSKLAFSYDGNVYPTQS
LELIPFFRLHNSRYAVYFRQASEEQFKTIQEEMATAERKATELANRTVDL
IFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNLKIKEEASQLM
ITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLKVGSC
EILFKPDGTEWTSAVYEVRLLK
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5opj Chain A Residue 902 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5opj Dietary pectic glycans are degraded by coordinated enzyme pathways in human colonic Bacteroides.
Resolution2.05 Å
Binding residue
(original residue number in PDB)		E339 C341 C416 C417
Binding residue
(residue number reindexed from 1)		E315 C317 C392 C393
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:5opj, PDBe:5opj, PDBj:5opj
PDBsum5opj
PubMed29255254
UniProtQ8AAW3

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