Structure of PDB 5o1j Chain A Binding Site BS02

Receptor Information
>5o1j Chain A (length=580) Species: 122586 (Neisseria meningitidis MC58) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AETADLSASVPTRPAEPERKTLADYGGYPSALDAVKQKNDAAVAAYLENA
GDSAMAENVRNEWLKSLGARRQWTLFAQEYAKLEPAGRAQEVECYADSSR
NDYTRAAELVKNTGKLPSGCTKLLEQAAASGLLDGNDAWRRVRGLLAGRQ
TTDARNLAAALGSPFDGGTQGSREYALLNVIGKEARKSPNAAALLSEMES
GLSLEQRSFAWGVLGHYQSQNLNVPAALDYYGKVADRRQLTDDQIEWYAR
AALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAATGNNQEAEKLYK
QAAATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVRRMAEDGAVKRALV
LFQNSQSAGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAV
NSAERTDRKLNYTLRYISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVI
GAQSRVGAQGLMQVMPATAREIAGKIGMDAAQLYTADGNIRMGTWYMADT
KRRLQNNEVLATAGYNAGPGRARRWQADTPLEGAVYAETIPFSETRDYVK
KVMANAAYYAALFGAPHIPLKQRMGIVPAR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5o1j Chain A Residue 704 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5o1j A step-by-stepin crystalloguide to bond cleavage and 1,6-anhydro-sugar product synthesis by a peptidoglycan-degrading lytic transglycosylase.
Resolution1.9 Å
Binding residue
(original residue number in PDB)		H463 D523
Binding residue
(residue number reindexed from 1)		H427 D487
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0046872 metal ion binding
Cellular Component
GO:0042597 periplasmic space

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Molecular Function
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Cellular Component
External links
PDB RCSB:5o1j, PDBe:5o1j, PDBj:5o1j
PDBsum5o1j
PubMed29483188
UniProtQ9JXP1

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