Structure of PDB 5mwk Chain A Binding Site BS02

Receptor Information
>5mwk Chain A (length=1040) Species: 818 (Bacteroides thetaiotaomicron) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LLREQFQNPSDEAKPWTFWYWMFGAVSKEGITADLEAMKRAGLGGTYLMP
IKGIKEGPQYNGKAQQLTPEWWEMVRFSMEEADRLGLKLGMHICDGFALA
GGPWMTPKESMQKIVWSDTIVDGGKIKGLHLPQPEAYEGFYEDISLFALP
VKEEAADVMPAQITCANIATGNHIDIKKTVNMDDAGVIRSSYPCYIQYEY
EQPFTCRNIEIILSGNNYQAHRLKVMASDDGVNYRLVKQLVPARQGWQNT
DENSTHAIPATTARYFRFYWTPEGSEPGSEDMDAAKWKPNLKIKELRLHR
EARLDQWEGKAGLVWRVASSTKKEEIGEQDCYALSQIINLTDPFERTLTA
TLPKGKWKLLRMGHTATGHTNATAGGGKGLECDKFNPKAVRKQFDNWFAQ
AFVKTNPDVARRVLKYMHVDSWQCGSQNWSDTFAAEFRKRRGYDLMPYLP
LLAGIPMESAERSEKILRDVRTTIGELVVDVFYQVLADCAKEYDCQFSAE
CVAPTMVSDGLLHYQKVDLPMGEFWLNSPTHDKPNDMLDAISGAHIYGKN
IIQAEGFTEVRGTWNEHPGILKALLDRNYALGINRLFFHVYVHNPWLDRK
PGMTLDGIGLFFQRDQTWWNKGAKAFCEYITRCQSLLQYGHPVADIAVFT
GEEMPRRSILPERLVPSLPGIFGAERVESERIRLANEGQPLRVRPVGVTH
SANMSDPEKWVNPLRGYAYDSFNKDALLRLAKAENGRMTLPGGASYKVLV
LPLPRPMNPDPAALSPEVKQKINELKEAGILIPSLPYKEDDFSSYGLERD
LIVPENIAWTHRQGEQGDIYFIANQLEETRTFTASMRIDGRKPECWNPVT
GEINADIPYEQKSHRTEITLTLAPNESVFIVYPATGLEATEYTVTFTANG
KTIQRQELFDWSKEEDEQIRYYSGTAVYKTTFRWKSKVKEDQQVYLNLGK
VCDLATVRVNGIDCGTIWTAPYRADITAALKKGVNELEIEVTNTWANALK
GADEGKAPFDGIWTNAKYRRAENTLLPAGLLGPLNFDVAN
Ligand information
Ligand IDARA
InChIInChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3-,4+,5+/m0/s1
InChIKeySRBFZHDQGSBBOR-QMKXCQHVSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C1C(C(C(C(O1)O)O)O)O
OpenEye OEToolkits 1.5.0C1[C@@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O
CACTVS 3.341O[C@H]1CO[C@@H](O)[C@H](O)[C@H]1O
CACTVS 3.341O[CH]1CO[CH](O)[CH](O)[CH]1O
ACDLabs 10.04OC1C(O)COC(O)C1O
FormulaC5 H10 O5
Namealpha-L-arabinopyranose;
alpha-L-arabinose;
L-arabinose;
arabinose
ChEMBLCHEMBL505348
DrugBank
ZINCZINC000001532575
PDB chain5mwk Chain B Residue 4 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5mwk Complex pectin metabolism by gut bacteria reveals novel catalytic functions.
Resolution2.0 Å
Binding residue
(original residue number in PDB)		W276 Q461 K571
Binding residue
(residue number reindexed from 1)		W247 Q423 K533
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links