Structure of PDB 5muj Chain A Binding Site BS02

Receptor Information
>5muj Chain A (length=352) Species: 226186 (Bacteroides thetaiotaomicron VPI-5482) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KVTQERMEQIYEEVKTPYKYGLAVAPTDNYHKIDCPTVFRQGDKWLMTYV
VYNGKTGTDGRGYETWIAESDNLLDWRTLGRVLSYRDGKWDCNQRGGFPA
LPDMEWGGSYELQTYKGRHWMTYIGGEGTGYEAVKAPLFVGLASTKGDIS
TAHEWESLDKPILSIHDKDAQWWEKLTQYKSTVYWDKDKTLGAPFVMFYN
AGGRHPETDLKGERVGIALSKDMKTWKRYPGNPVFAHEADGTITGDAHIQ
KMGDVYVMFYFSAFEPSRKYKAFNTFAASYDLVNWTDWHGADLIIPSKNY
DELFAHKSYVIKHDGVVYHFYCAVNNAEQRGIAIATSKPMGRSAVRFPKP
ET
Ligand information
Ligand ID8PK
InChIInChI=1S/C9H18O6/c1-4-7(15-5(2)10)6(11)8(13-3)9(12)14-4/h4-12H,1-3H3/t4-,5+,6+,7+,8-,9+/m0/s1
InChIKeyMOOIWRPNHMPYOB-BARZSYDPSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.6C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O)OC)O)O[C@H](C)O
OpenEye OEToolkits 2.0.6CC1C(C(C(C(O1)O)OC)O)OC(C)O
CACTVS 3.385CO[CH]1[CH](O)O[CH](C)[CH](O[CH](C)O)[CH]1O
CACTVS 3.385CO[C@@H]1[C@H](O)O[C@@H](C)[C@@H](O[C@H](C)O)[C@H]1O
FormulaC9 H18 O6
Name4-O-[(1R)-1-hydroxyethyl]-2-O-methyl-alpha-L-fucopyranose;
2-O-methyl, 4-O-Acetyl-alpha-L-fucosepyranose;
6-deoxy-4-O-[(1R)-1-hydroxyethyl]-2-O-methyl-alpha-L-galactopyranose;
4-O-[(1R)-1-hydroxyethyl]-2-O-methyl-alpha-L-fucose;
4-O-[(1R)-1-hydroxyethyl]-2-O-methyl-L-fucose;
4-O-[(1R)-1-hydroxyethyl]-2-O-methyl-fucose
ChEMBL
DrugBank
ZINC
PDB chain5muj Chain B Residue 8 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5muj Complex pectin metabolism by gut bacteria reveals novel catalytic functions.
Resolution1.37 Å
Binding residue
(original residue number in PDB)
L203 T204 Y206 K238
Binding residue
(residue number reindexed from 1)
L176 T177 Y179 K211
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links