Structure of PDB 5mjh Chain A Binding Site BS02

Receptor Information
>5mjh Chain A (length=368) Species: 1200984 (Streptomyces lividans 1326) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TPLTSLGSEQAMFHGKHQPGITTPMQARGHLVAFDLAAGAGRKEAAALLR
RWSDTARRLMAGEPAGSRDTDVARDAGPSSLTVTFGFGHSFFGRTGLEKQ
RPVALDPLPDFSSDHLDKNRSNGDLWVQIGADDALVAFHALRAIQRDAGA
AARVRWQMNGFNRSPGATAHPMTARNLMGQVDGTRNPKPGEADFDRRIFV
PEGPAWMANGSYVVVRRIRMLLDDWEELSLKAQEDVIGRRKSDGAPLSGG
SGATESTEMDLEKTDGSGELVVPINAHARITRPDQNGGAAMVRRPFSYHD
GFDADGVPDAGLLFVCWQADPLRGFVPVQRKLDRGDALSQFIRHEASGLF
AVPGGAAEGEYVGQRLLE
Ligand information
Ligand IDOXY
InChIInChI=1S/O2/c1-2
InChIKeyMYMOFIZGZYHOMD-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341
OpenEye OEToolkits 1.5.0
O=O
FormulaO2
NameOXYGEN MOLECULE
ChEMBLCHEMBL1234886
DrugBankDB09140
ZINC
PDB chain5mjh Chain A Residue 1402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5mjh Photoreduction and validation of haem-ligand intermediate states in protein crystals by in situ single-crystal spectroscopy and diffraction.
Resolution1.45 Å
Binding residue
(original residue number in PDB)
D251 R369
Binding residue
(residue number reindexed from 1)
D182 R293
Annotation score4
Gene Ontology
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UnboundLocalError
Python 3.6.8: /usr/bin/python3
Fri Nov 29 06:22:17 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '5mjh', asym_id = 'A', bs = 'BS02', title = 'Photoreduction and validation of haem-ligand int...itu single-crystal spectroscopy and diffraction. '
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='5mjh', asym_id='A', bs='BS02', title='Photoreduction and validation of haem-ligand int...itu single-crystal spectroscopy and diffraction. ')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0004601,0020037,0033212', uniprot = '', pdbid = '5mjh', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004601,0020037,0033212', uniprot='', pdbid='5mjh', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>