Structure of PDB 5lni Chain A Binding Site BS02
Receptor Information
>5lni Chain A (length=359) Species:
303
(Pseudomonas putida) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SALFEPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAG
LLVVEATAVAPEGRITPGCAGIWSDAHAQAFVPVVQAIKAAGSVPGIQIA
HAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTLD
DIARVKQDFVDAARRARDAGFEWIELHFAHGFLGQSFFSEHSNKRTDAYG
GSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIEL
ARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSA
WGFGTPQLAEAALQANQLDLVSVGRAHLADPHWAYFAAKELGVEKASWTL
PAPYAHWLE
Ligand information
Ligand ID
07L
InChI
InChI=1S/C9H6O3/c10-7-3-1-6-2-4-9(11)12-8(6)5-7/h1-5,10H
InChIKey
ORHBXUUXSCNDEV-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.2
c1cc2c(cc1O)OC(=O)C=C2
ACDLabs 12.01
O=C2Oc1cc(O)ccc1C=C2
CACTVS 3.370
Oc1ccc2C=CC(=O)Oc2c1
Formula
C9 H6 O3
Name
7-hydroxy-2H-chromen-2-one;
7-hydroxycoumarin
ChEMBL
CHEMBL51628
DrugBank
ZINC
ZINC000000058111
PDB chain
5lni Chain A Residue 402 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5lni
Redox-dependent substrate-cofactor interactions in the Michaelis-complex of a flavin-dependent oxidoreductase
Resolution
1.133 Å
Binding residue
(original residue number in PDB)
Y27 H178 H181 F183 W302
Binding residue
(residue number reindexed from 1)
Y26 H177 H180 F182 W301
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
C25 H178 H181 F183 R231 R240
Catalytic site (residue number reindexed from 1)
C24 H177 H180 F182 R230 R239
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0003959
NADPH dehydrogenase activity
GO:0010181
FMN binding
GO:0016491
oxidoreductase activity
GO:0050661
NADP binding
View graph for
Molecular Function
External links
PDB
RCSB:5lni
,
PDBe:5lni
,
PDBj:5lni
PDBsum
5lni
PubMed
UniProt
A0A1X0ZT96
[
Back to BioLiP
]