Structure of PDB 5l4r Chain A Binding Site BS02

Receptor Information
>5l4r Chain A (length=207) Species: 4621 (Thaumatococcus daniellii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ATFEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTNGGKI
WARTDCYFDDSGSGICKTGDCGGLLRCKRFGRPPTTLAEFSLNQYGKDYI
DISNIKGFNVPMNFSPTTRGCRGVRCAADIVGQCPAKLKAPGGGCNDACT
VFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPTTVTCPGSSNYR
VTFCPTA
Ligand information
Ligand ID73M
InChIInChI=1S/ClH.2H2N.H2O.Pt/h1H;3*1H2;/q;2*-1;;+4/p-2
InChIKeyDOKMFIMZADYDDQ-UHFFFAOYSA-L
SMILES
SoftwareSMILES
CACTVS 3.385N[Pt@@](N)(O)Cl
CACTVS 3.385
OpenEye OEToolkits 2.0.5
N[Pt](N)(O)Cl
FormulaCl H5 N2 O Pt
Namebis(azanyl)-chloranyl-oxidanyl-platinum
ChEMBL
DrugBank
ZINC
PDB chain5l4r Chain A Residue 509 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5l4r Cisplatin-Protein Interactions: Unexpected Drug Binding to N-Terminal Amine and Lysine Side Chains.
Resolution1.45 Å
Binding residue
(original residue number in PDB)
R82 T150
Binding residue
(residue number reindexed from 1)
R82 T150
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006952 defense response
Cellular Component
GO:0005576 extracellular region
GO:0031410 cytoplasmic vesicle

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:5l4r, PDBe:5l4r, PDBj:5l4r
PDBsum5l4r
PubMed27482735
UniProtP02883|THM1_THADA Thaumatin I

[Back to BioLiP]