Structure of PDB 5kw9 Chain A Binding Site BS02

Receptor Information
>5kw9 Chain A (length=289) Species: 11983 (Norwalk virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RPFTLPNLPLSSLSNSRAPLPISSMGISPDNVQSVQFQNGRCTLDGRLVG
TTPVSLSHVAKIRGTSNGTVINLTELDGTPFHPFEGPAPIGFPDLGGCDW
HINMTQFGHSSQTQYDVDTTPDTFVPHLGSIQANGIGSGNYVGVLSWISP
PSHPSGSQVDLWKIPNYGSSITEATHLAPSVYPPGFGEVLVFFMSKMPGP
GAYNLPCLLPQEYISHLASEQAPTVGEAALLHYVDPDTGRNLGEFKAYPD
GFLTCVPNASSGPQQLPINGVFVFVSWVSRFYQLKPVGT
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain5kw9 Chain A Residue 605 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5kw9 Structural basis for norovirus neutralization by an HBGA blocking human IgA antibody.
Resolution2.3 Å
Binding residue
(original residue number in PDB)		R269 C270 D478 G479
Binding residue
(residue number reindexed from 1)		R41 C42 D250 G251
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5kw9, PDBe:5kw9, PDBj:5kw9
PDBsum5kw9
PubMed27647885
UniProtQ83884|CAPSD_NVN68 Capsid protein VP1 (Gene Name=ORF2)

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