Structure of PDB 5jli Chain A Binding Site BS02
Receptor Information
>5jli Chain A (length=127) Species:
85698
(Achromobacter xylosoxidans) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PFAKPEDAVKYRQSAATLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKT
LSALPWAAFGPGTEGGDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAG
DLDKLRAAFGDVGASCKACHDAYRKKK
Ligand information
Ligand ID
ASC
InChI
InChI=1S/C6H8O6/c7-1-2(8)5-3(9)4(10)6(11)12-5/h2,5,7-10H,1H2/t2-,5+/m0/s1
InChIKey
CIWBSHSKHKDKBQ-JLAZNSOCSA-N
SMILES
Software
SMILES
CACTVS 3.341
OC[CH](O)[CH]1OC(=O)C(=C1O)O
OpenEye OEToolkits 1.5.0
C(C(C1C(=C(C(=O)O1)O)O)O)O
OpenEye OEToolkits 1.5.0
C([C@@H]([C@@H]1C(=C(C(=O)O1)O)O)O)O
CACTVS 3.341
OC[C@H](O)[C@H]1OC(=O)C(=C1O)O
ACDLabs 10.04
O=C1OC(C(O)=C1O)C(O)CO
Formula
C6 H8 O6
Name
ASCORBIC ACID;
Vitamin C
ChEMBL
CHEMBL196
DrugBank
DB00126
ZINC
ZINC000100006770
PDB chain
5jli Chain A Residue 202 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5jli
Engineering proximal vs. distal heme-NO coordination via dinitrosyl dynamics: implications for NO sensor design.
Resolution
1.55 Å
Binding residue
(original residue number in PDB)
F23 G113 H120
Binding residue
(residue number reindexed from 1)
F23 G113 H120
Annotation score
3
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0009055
electron transfer activity
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0022900
electron transport chain
Cellular Component
GO:0042597
periplasmic space
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5jli
,
PDBe:5jli
,
PDBj:5jli
PDBsum
5jli
PubMed
28451315
UniProt
P00138
|CYCP_ALCXX Cytochrome c'
[
Back to BioLiP
]