Structure of PDB 5de3 Chain A Binding Site BS02

Receptor Information

>5de3 Chain A (length=166) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

ARILVLGLDNAGKTTILKALSEEDITTITPTQGFNIKSLSRDGFNLKIWD
IGGQKSIRPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMT
GVPLLVFANKQDLVGALAADEIASTLDLTSIRDRPWQIQACSAKQGTGLK
EGMEWMMKQVKLEHHH

Ligand information

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

5de3 Chain A Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5de3 The Crystal structure of Chlamydomonas reinhardtii Arl3 bound to GppNHp
Resolution	1.417 Å
Binding residue (original residue number in PDB)	T30 T47
Binding residue (residue number reindexed from 1)	T14 T31
Annotation score	1

Enzymatic activity

Catalytic site (original residue number in PDB)	Q70
Catalytic site (residue number reindexed from 1)	Q54
Enzyme Commision number	?

Gene Ontology

	Molecular Function
GO:0003924	GTPase activity
GO:0005525	GTP binding

	Biological Process
GO:0015031	protein transport
GO:0051301	cell division

	Cellular Component
GO:0000139	Golgi membrane
GO:0005634	nucleus
GO:0005737	cytoplasm
GO:0005794	Golgi apparatus
GO:0005815	microtubule organizing center
GO:0005819	spindle
GO:0005856	cytoskeleton
GO:0016020	membrane

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Cellular Component

External links

PDB	RCSB:5de3, PDBe:5de3, PDBj:5de3
PDBsum	5de3
PubMed
UniProt	A8ISN6\|ARL3_CHLRE ADP-ribosylation factor-like protein 3 (Gene Name=ARL3)

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