Structure of PDB 5d86 Chain A Binding Site BS02

Receptor Information
>5d86 Chain A (length=318) Species: 426430 (Staphylococcus aureus subsp. aureus str. Newman) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
CHDSLLDSVGQTPMVQLHQLFPKHEVFAKLEYMNPGGSMKDRPAKYIIEH
GIKHGLITENTHLIESTSGNLGIALAMIAKIKGLKLTCVVDPKISPTNLK
IIKSYGANVEMVEEPDAHGGYLMTRIAKVQELLATIDDAYWINQFANELN
WQSHYHGAGTEIVETIKQPIDYFVAPVSTTGSIMGMSRKIKEVHPNAQIV
AVDAKGSVIFGDKPINRELPGIGASRVPEILNRSEINQVIHVDDYQSALG
CRKLIDYEGIFAGGSTGSIIAAIEQLITSIEEGATIVTILPDRGDRYLDL
VYSDTWLEKMKSRQGVKS
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain5d86 Chain A Residue 1003 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5d86 Deciphering the Substrate Specificity of SbnA, the Enzyme Catalyzing the First Step in Staphyloferrin B Biosynthesis.
Resolution1.5 Å
Binding residue
(original residue number in PDB)		S232 R233
Binding residue
(residue number reindexed from 1)		S225 R226
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) K47 S272
Catalytic site (residue number reindexed from 1) K40 S265
Enzyme Commision number 2.5.1.140: N-(2-amino-2-carboxyethyl)-L-glutamate synthase.
Gene Ontology
Molecular Function
GO:0004124 cysteine synthase activity
GO:0016740 transferase activity
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
Biological Process
GO:0006535 cysteine biosynthetic process from serine
GO:0019344 cysteine biosynthetic process
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5d86, PDBe:5d86, PDBj:5d86
PDBsum5d86
PubMed26794841
UniProtA6QDA0|SBNA_STAAE N-(2-amino-2-carboxyethyl)-L-glutamate synthase (Gene Name=sbnA)

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