Structure of PDB 5d2u Chain A Binding Site BS02

Receptor Information
>5d2u Chain A (length=240) Species: 197221 (Thermosynechococcus vestitus BP-1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MDVAGLTDCGLIRKSNQDAFYIDEKHQRFFIVADGMGGAAGGEEASRLAV
DHIRQYLETHLEDLQHDPVTLLRQAFLAANHAIVEQQRQNSARADMGTTA
VVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQAVQLGSLT
IEQARQHPWRHVLSQCLGREDLSQIDIQPIDLEPGDRLLLCSDGLTEELT
DDVISIYLSEPNVQKAAAALVDAAKTHGGRDNVTVVVISV
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain5d2u Chain A Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5d2u Structural and Biochemical Characterization of a Cyanobacterial PP2C Phosphatase Reveals Insights into Catalytic Mechanism and Substrate Recognition
Resolution1.8 Å
Binding residue
(original residue number in PDB)
D34 G35
Binding residue
(residue number reindexed from 1)
D34 G35
Annotation score1
Enzymatic activity
Enzyme Commision number 3.1.3.16: protein-serine/threonine phosphatase.
Gene Ontology
Molecular Function
GO:0004722 protein serine/threonine phosphatase activity
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006470 protein dephosphorylation

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5d2u, PDBe:5d2u, PDBj:5d2u
PDBsum5d2u
PubMed
UniProtQ8DGS1

[Back to BioLiP]